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View Structure Prediction Details

Protein: TC753_ARATH
Organism: Arabidopsis thaliana
Length: 818 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TC753_ARATH.

Description E-value Query
Range
Subject
Range
TOC75_PEA - Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1
484.0 [0..10] [818..5]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFSVNGQL IPTATSSTAS TSLSSRRKFL SPSSSRLPRI STQSPRVPSI KCSKSLPNRD  60
   61 TETSSKDSLL KNLAKPLAVA SVSSAASFFL FRISNLPSVL TGGGGGGDGN FGGFGGGGGG 120
  121 GDGNDGGFWG KLFSPSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVADEEQSPD WDSHGLPANI VVQLNKLSGF KKYKVSDIMF FDRRRQTTIG TEDSFFEMVS  60
   61 IRPGGVYTKA QLQKELETLA TCGMFEKVDL EGKTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.39794
Match: 2qczA
Description: No description for 2qczA was found.

Predicted Domain #3
Region A:
Residues: [233-818]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDGTLGVTIS FAESTWQSAD RFRCINVGLM VQSKPIEMDS DMTDKEKLEY YRSLEKDYKR  60
   61 RIDRARPCLL PAPVYGEVMQ MLRDQGKVSA RLLQRIRDRV QKWYHDEGYA CAQVVNFGNL 120
  121 NTKEVVCEVV EGDITQLVIQ FQDKLGNVVE GNTQVPVVRR ELPKQLRQGY VFNIEAGKKA 180
  181 LSNINSLGLF SNIEVNPRPD EKNEGGIIVE IKLKELEQKS AEVSTEWSIV PGRGGAPTLA 240
  241 SFQPGGSVTF EHRNLQGLNR SLMGSVTTSN FLNPQDDLSF KLEYVHPYLD GVYNPRNRTF 300
  301 KTSCFNSRKL SPVFTGGPGV EEVPPIWVDR AGVKANITEN FTRQSKFTYG LVMEEITTRD 360
  361 ESSHIAANGQ RLLPSGGISA DGPPTTLSGT GVDRMAFLQA NITRDNTKFV NGAVVGQRTV 420
  421 FQVDQGLGIG SKFPFFNRHQ LTMTKFIQLR EVEQGAGKSP PPVLVLHGHY GGCVGDLPSY 480
  481 DAFVLGGPYS VRGYNMGELG AARNIAEVGA EIRIPVKNTH VYAFVEHGND LGSSKDVKGN 540
  541 PTAVYRRTGQ GSSYGAGVKL GLVRAEYAVD HNNGTGALFF RFGERY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 2qdzA
Description: No description for 2qdzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle