YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|17065530, gi|...
Organism: Arabidopsis thaliana
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17065530, gi|....

Description E-value Query
Range
Subject
Range
gi|125559024 - gi|125559024|gb|EAZ04560.1| hypothetical protein OsI_025792 [Oryza sativa (indica cultivar-group)]
gi|113611702, gi... - gi|125600936|gb|EAZ40512.1| hypothetical protein OsJ_023995 [Oryza sativa (japonica cultivar-group)]...
155.0 [0..9] [129..223]

Back

Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFEMNDRK KIGLGLTGFG VFFSFLGIVF VFDKGLLAMG NILFISGVSL TIGFKSTMQF  60
   61 FMKRQNYKGT ISFGVGFFFV IIGWPILGMM LETYGFFVLF SGFWPTLAVF AQKIPVLGWI 120
  121 IQQPYIRSFF DKYRGKRVPV 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 67.376751
Match: PF04178.3
Description: No description for PF04178.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle