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View Structure Prediction Details

Protein: PNSB5_ARATH
Organism: Arabidopsis thaliana
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNSB5_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553802 - gi|21553802|gb|AAM62895.1| unknown [Arabidopsis thaliana]
437.0 [0..1] [212..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVTILSPK SIPKVTDSKF GARVSDQIVN VVKCGKSGRR LKLAKLVSAA GLSQIEPDIN  60
   61 EDPIGQFETN SIEMEDFKYG YYDGAHTYYE GEVQKGTFWG AIADDIAAVD QTNGFQGLIS 120
  121 CMFLPAIALG MYFDAPGEYL FIGAALFTVV FCIIEMDKPD QPHNFEPQIY KLERGARDKL 180
  181 INDYNTMSIW DFNDKYGDVW DFTIEKDDIA TR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.458 N/A N/A a.1.1 Globin-like
View Download 0.450 N/A N/A b.60.1 Lipocalins
View Download 0.424 N/A N/A c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.410 N/A N/A b.60.1 Lipocalins
View Download 0.399 N/A N/A a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle