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View Structure Prediction Details

Protein: ACCO2_ARATH
Organism: Arabidopsis thaliana
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|73761685 - gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum]
369.0 [0..4] [317..2]

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Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNMKFPVV DLSKLNGEER DQTMALINEA CENWGFFEIV NHGLPHDLMD KIEKMTKDHY  60
   61 KTCQEQKFND MLKSKGLDNL ETEVEDVDWE STFYVRHLPQ SNLNDISDVS DEYRTAMKDF 120
  121 GKRLENLAED LLDLLCENLG LEKGYLKKVF HGTKGPTFGT KVSNYPPCPK PEMIKGLRAH 180
  181 TDAGGIILLF QDDKVSGLQL LKDGDWIDVP PLNHSIVINL GDQLEVITNG KYKSVLHRVV 240
  241 TQQEGNRMSV ASFYNPGSDA EISPATSLVE KDSEYPSFVF DDYMKLYAGV KFQPKEPRFA 300
  301 AMKNASAVTE LNPTAAVETF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.154902
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle