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View Structure Prediction Details

Protein: APS2_ARATH
Organism: Arabidopsis thaliana
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554234 - gi|21554234|gb|AAM63309.1| sulfate adenylyltransferase [Arabidopsis thaliana]
654.0 [0..1] [476..1]

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Predicted Domain #1
Region A:
Residues: [1-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLMIRSSYV SHITLFQPRN SKPSSFTNQI SFLSSSNNNP FLNLVYKRNL TMQSVSKMTV  60
   61 KSSLIDPDGG ELVELIVPET EIGVKKAESE TMPKVKLNQI DLEWVHVISE GWASPLKGFM 120
  121 REDEYLQSLH FNSLRLKNGT FVNMSLPIVL AIDDDTKEQI GSSENVALVC PQGDIIGSLR 180
  181 SVEIYKHNKE ERIARTWGTT SPGLPYVEEY ITPSGNWLIG GDLEVFEPIK YNDGLDHYRL 240
  241 SPKQLREEFD NRQADAVFAF QLRNPVHNGH ALLMNDTRKR LLEMGYKNPV LLLHPLGGFT 300
  301 KADDVPLDVR MEQHSKVLED GVLDPKTTIV SIFPSPMHYA GPTEVQWHAK ARINAGANFY 360
  361 IVGRDPAGMG HPTEKRDLYD PDHGKRVLSM APGLEKLNIL PFRVAAYDTI EKKMAFFDPS 420
  421 RAKEFLFISG TKMRTYARTG ENPPDGFMCP SGWNVLVKYY ESLQESEAKQ QAVVSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 171.0
Match: 1x6vB
Description: The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity 1.01418518097034 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 0.922796692287058 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 0.922796692287058 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 0.911887616296893 bayes_pls_golite062009
adenylyltransferase activity 0.19674866587635 bayes_pls_golite062009
sulfate adenylyltransferase activity 0.131596240193754 bayes_pls_golite062009
sulfate adenylyltransferase (ATP) activity 0.118324944285084 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle