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View Structure Prediction Details

Protein: gi|790583, gi|20...
Organism: Arabidopsis thaliana
Length: 80 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|790583, gi|20....

Description E-value Query
Range
Subject
Range
gi|88010886, gi|... - gi|88010886|gb|ABD38868.1| At1g01170 [Arabidopsis thaliana], gi|79316234|ref|NP_001030926.1| ozone-r...
152.0 [0..3] [80..6]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRATYIIGA LAGSAVVAYV CDKVISDDKL FGGTTPGTIT NKEWGAATEE RLQAWPRVAG  60
   61 PPVVMNPISR QNFIVKSRPE 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 51.657577
Match: PF06592.4
Description: No description for PF06592.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.645 N/A N/A d.15.7 Immunoglobulin-binding domains
View Download 0.643 N/A N/A d.15.7 Immunoglobulin-binding domains
View Download 0.601 N/A N/A d.230.3 Amyloid beta a4 protein copper binding domain (domain 2)
View Download 0.433 N/A N/A d.74.2 C-terminal domain of arginine repressor
View Download 0.405 N/A N/A d.15.7 Immunoglobulin-binding domains


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle