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View Structure Prediction Details

Protein: APS1_ARATH
Organism: Arabidopsis thaliana
Length: 463 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|74268037, gi|... - gi|77735371|ref|NP_001029382.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos taurus], gi|74...
624.0 [0..5] [452..179]

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Predicted Domain #1
Region A:
Residues: [1-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMAAVLSK TPFLSQPLTK SSPNSDLPFA AVSFPSKSLR RRVGSIRAGL IAPDGGKLVE  60
   61 LIVEEPKRRE KKHEAADLPR VELTAIDLQW MHVLSEGWAS PLGGFMRESE FLQTLHFNSL 120
  121 RLDDGSVVNM SVPIVLAIDD EQKARIGEST RVALFNSDGN PVAILSDIEI YKHPKEERIA 180
  181 RTWGTTAPGL PYVDEAITNA GNWLIGGDLE VLEPVKYNDG LDRFRLSPAE LRKELEKRNA 240
  241 DAVFAFQLRN PVHNGHALLM TDTRRRLLEM GYKNPILLLH PLGGFTKADD VPLDWRMKQH 300
  301 EKVLEDGVLD PETTVVSIFP SPMHYAGPTE VQWHAKARIN AGANFYIVGR DPAGMGHPVE 360
  361 KRDLYDADHG KKVLSMAPGL ERLNILPFRV AAYDKTQGKM AFFDPSRPQD FLFISGTKMR 420
  421 TLAKNNENPP DGFMCPGGWK VLVDYYESLT PAGNGRLPEV VPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 177.0
Match: 1x6vB
Description: The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity 1.01418518097034 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 0.922796692287058 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 0.922796692287058 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 0.911887616296893 bayes_pls_golite062009
adenylyltransferase activity 0.19674866587635 bayes_pls_golite062009
sulfate adenylyltransferase activity 0.131596240193754 bayes_pls_golite062009
sulfate adenylyltransferase (ATP) activity 0.118324944285084 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle