YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15218623, gi|...
Organism: Arabidopsis thaliana
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15218623, gi|....

Description E-value Query
Range
Subject
Range
gi|82542049 - gi|82542049|gb|ABB82032.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
320.0 [0..2] [362..7]

Back

Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSATATYNY DVFLSFRGPD TRRKFISFLY KELVGRDIRT FKDDKELENG QMISPELILA  60
   61 IEDSRFAVVV VSVNYAASSW CLDELVKIMD IQKNKGSITV MPIFYGVNPC HLRRQIGDVA 120
  121 EQFKKHEARE KDLEKVLKWR QALAALADIS GDCSGEDDSK LVDVIADKIS KELMIVTRIS 180
  181 NGRNLVGIDK HMNELNRLMD LNSNKGKRMV GIWARGGSCR SALAKYVYQT SCQHFDSHCF 240
  241 LGNVKRICQG NYFESHLHKE FLDNIQGENS SKQSLKKQKV LLVADDVDKL EQLDALAGDF 300
  301 SGFGPGSVVI ITTKDKQLLI SYGIQLVYEA EFLTFQKFCR SFRSLAFKKR DDISAAFEWA 360
  361 LYI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.1
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle