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View Structure Prediction Details

Protein: FTSH7_ARATH
Organism: Arabidopsis thaliana
Length: 802 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FTSH7_ARATH.

Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTFEFLQP RIHGFATCCS SNSLLYSKAS RFFNDRCRVY RQNPNRFVSN SITLPLQKKQ  60
   61 VTVLRNHERF NLWDGFSRKK SRLVVNCQED DQNESSSEEE ESSQSTPAKS ERKREKKEDK 120
  121 VWWSKGKKWQ WQP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIQAQGIGVL LLQLSVVMFV MRLLRPGIPL PGSEPRIQTT FVSVPYSEFL SKVNSNQVQK  60
   61 VEVDGVQVLF KLRDDGKWQE SETSRLSQSS ESLLRTVAPT KRVVYSTTRP GDIKTPYEKM 120
  121 LGNNVEFGSP EKRSGGFFNS ALIALFYIAV LAGLIRFPVS FSTSSTGQLR TRKAGGPD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [312-802]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGKVSGGGET ITFADVAGVD EAKEELEEIV EFLRNPEKYV RLGARPPRGV LLVGLPGTGK  60
   61 TLLAKAVAGE AEVPFISCSA SEFVELYVGM GASRVRDLFA RAKKEAPSII FIDEIDAVAK 120
  121 SRDGKFRMGS NDEREQTLNQ LLTEMDGFDS NSAVIVLGAT NRADVLDPAL RRPGRFDRVV 180
  181 TVETPDKIGR ESILRVHVSK KELPLGDDVN LGSIASMTTG FTGADLANLV NEAALLAGRK 240
  241 NKTNVEKIDF IQAVERSIAG IEKKSARLKG NEKAVVARHE AGHAVVGTAV ANLLTGQPRV 300
  301 EKLSILPRTG GALGFTYIPP TSEDRYLLFI DELLGRLVTL LGGRAAEEVV YSGRISTGAF 360
  361 DDIRRATDMA YKAVAEYGLN QKIGPVSVAT LSGGGIDDSG GSPWGRDQGK LVDLVQKEVT 420
  421 ILLQSALDVA LSVVRANPDV LEGLGAQLEE KEKVEGEELQ KWLSMVVAPE ELAVFVEGKQ 480
  481 ELLLPAQASS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle