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View Structure Prediction Details

Protein: PPA28_ARATH
Organism: Arabidopsis thaliana
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPA28_ARATH.

Description E-value Query
Range
Subject
Range
gi|125556637 - gi|125556637|gb|EAZ02243.1| hypothetical protein OsI_24342 [Oryza sativa Indica Group]
gi|115469740, gi... - gi|215769245|dbj|BAH01474.1| unnamed protein product [Oryza sativa Japonica Group], gi|115469740|ref...
220.0 [0..36] [393..34]

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Predicted Domain #1
Region A:
Residues: [1-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCSIGNWKH TVLYLTLIVS LLYFIESLIS HKLHINYNKI RLKRSPNLPL RFRDDGTFKI  60
   61 LQVADMHFGM GMITRCRDVL DSEFEYCSDL NTTRFLRRMI ESERPDLIAF TGDNIFGSST 120
  121 TDAAESLLEA IGPAIEYGIP WAAVLGNHDH ESTLNRLELM TFLSLMDFSV SQINPLVEDE 180
  181 TKGDTMRLID GFGNYRVRVY GAPGSVLANS TVFDLFFFDS GDREIVQGKR TYGWIKESQL 240
  241 RWLQDTSIQG HSQRIHVNPP ALAFFHIPIL EVRELWYTPF IGQFQEGVAC SIVQSGVLQT 300
  301 FVSMGNVKAA FMGHDHVNDF CGTLKGVWFC YGGGFGYHAY GRPNWHRRAR VIEAKLGKGR 360
  361 DTWEGIKLIK TWKRLDDEYL SKIDEQVLWE TSDSFLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1xzwA
Description: Sweet potato purple acid phosphatase/phosphate complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle