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View Structure Prediction Details

Protein: gi|10177534, gi|...
Organism: Arabidopsis thaliana
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177534, gi|....

Description E-value Query
Range
Subject
Range
gi|50928507, gi|... - gi|50928507|ref|XP_473781.1| OSJNBa0041A02.19 [Oryza sativa (japonica cultivar-group)], gi|38344152|...
gi|116309662 - gi|116309662|emb|CAH66711.1| OSIGBa0118P15.1 [Oryza sativa (indica cultivar-group)]
234.0 [0..20] [305..7]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVSVSNSF LTFNSPNQLR FSRRRFSAMA SSTTGVRVAE GEGNLPKLVL TSPQNSEAEI  60
   61 YLFGGCITSW KVASGKDLLF VRPDAVFNKI KPISGGIPHC FPQFGPGLIQ QHGFGRNMDW 120
  121 SVVDSQNADD NAAVTLELKD GPYSRAMWDF AFQALYKVIV GADSLSTELK ITNTDDKPFS 180
  181 FSTALHTYFR ASSAGASVRG LKGCKTLNKD PDPKNPIEGK EDRDAVTFPG FVDTVYLDAP 240
  241 NELQFDNGLG DKIIIKNTNW SDAVLWNPHT QMEACYRDFV CVENAKLGDV KLEPGQSWTA 300
  301 TQLLSIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 2htaA
Description: No description for 2htaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle