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View Structure Prediction Details

Protein: CDPKL_ARATH
Organism: Arabidopsis thaliana
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDPKL_ARATH.

Description E-value Query
Range
Subject
Range
gi|15292915 - gi|15292915|gb|AAK92828.1| putative calcium dependent protein kinase [Arabidopsis thaliana]
458.0 [0..1] [531..1]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCFSSKHRK TQNDGGEKSI PINPVQTHVV PEHRKPQTPT PKPMTQPIHQ QISTPSSNPV  60
   61 SVRDPDTILG KPFEDIRKFY SLGKELGRGQ FGITYMCKEI GTGNTYACKS ILKRKLISKQ 120
  121 DKEDVKREIQ IMQYLSGQPN IVEIKGAYED RQSIHLVMEL CAGGELFDRI IAQGHYSERA 180
  181 AAGIIRSIVN VVQICHFMGV VHRDLKPENF LLSSKEENAM LKATDFGLSV FIEEGKVYRD 240
  241 IVGSAYYVAP EVLRRSYGKE IDIWSAGVIL YILLSGVPPF WAENEKGIFD EVIKGEIDFV 300
  301 SEPWPSISES AKDLVRKMLT KDPKRRITAA QVLEHPWIKG G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.39794
Match: 1qcfA
Description: Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [342-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAPDKPIDSA VLSRMKQFRA MNKLKKLALK VIAESLSEEE IKGLKTMFAN IDTDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.0
Match: 1a06A
Description: CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [397-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGTITYEELK TGLTRLGSRL SETEVKQLME AADVDGNGTI DYYEFISATM HRYKLDRDEH  60
   61 VYKAFQHFDK DNSGHITRDE LESAMKEYGM GDEASIKEVI SEVDTDNDGR INFEEFCAMM 120
  121 RSGSTQPQGK LLPFH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.09691
Match: 2jnfA
Description: No description for 2jnfA was found.

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