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View Structure Prediction Details

Protein: gi|7267434, gi|2...
Organism: Arabidopsis thaliana
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267434, gi|2....

Description E-value Query
Range
Subject
Range
gi|73959879 - gi|73959879|ref|XP_854405.1| PREDICTED: similar to DNA-directed RNA polymerases III 12.5 kDa polypep...
119.0 [0..1] [105..26]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFCPTCGNL LRYEGGGSSR FFCSTCPYVA NIERRVEIKK KQLLVKKSIE PVVTKDDIPT  60
   61 AAETEAPCPR CGHDKAYFKS MQIRSADEPE SRFYRCLKCE FTWREE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.522879
Match: 1i3qI
Description: RBP9 subunit of RNA polymerase II
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle