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View Structure Prediction Details

Protein: YAO_ARATH
Organism: Arabidopsis thaliana
Length: 504 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAO_ARATH.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
455.0 [0..38] [497..1263]

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Predicted Domain #1
Region A:
Residues: [1-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYNNEKKKG GSFKRGGKKG SNERDPFFEE EPKKRRKVSY DDDDIESVDS DAEENGFTGG  60
   61 DEDGRRVDGE VEDEDEFADE TAGEKRKRLA EEMLNRRREA MRREREEADN DDDDDEDDDE 120
  121 TIKKSLMQKQ QEDSGRIRRL IASRVQEPLS TDGFSVIVKH RRSVVSVALS DDDSRGFSAS 180
  181 KDGTIMHWDV SSGKTDKYIW PSDEILKSHG MKLREPRNKN HSRESLALAV SSDGRYLATG 240
  241 GVDRHVHIWD VRTREHVQAF PGHRNTVSCL CFRYGTSELY SGSFDRTVKV WNVEDKAFIT 300
  301 ENHGHQGEIL AIDALRKERA LTVGRDRTML YHKVPESTRM IYRAPASSLE SCCFISDNEY 360
  361 LSGSDNGTVA LWGMLKKKPV FVFKNAHQDI PDGITTNGIL ENGDHEPVNN NCSANSWVNA 420
  421 VATSRGSDLA ASGAGNGFVR LWAVETNAIR PLYELPLTGF VNSLAFAKSG KFLIAGVGQE 480
  481 TRFGRWGCLK SAQNGVAIHP LRLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle