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View Structure Prediction Details

Protein: ATB14_ARATH
Organism: Arabidopsis thaliana
Length: 852 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ATB14_ARATH.

Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP  60
   61 ILSNIEPKQI KVWFQNRRCR EKQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1b72A
Description: Homeobox protein hox-b1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [85-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEAARLQTVN RKLNAMNKLL MEENDRLQKQ VSNLVYENGH MKHQLHTASG TTTDNSCESV  60
   61 VVSGQQHQQQ NPNPQHQQRD ANNPAGLLSI AEEALAEFLS KATGTAVDWV QMIGMKPGPD 120
  121 SIGIVAISRN CS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [217-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIAARACGLV SLEPMKVAEI LKDRPSWLRD CRSVDTLSVI PAGNGGTIEL IYTQMYAPTT  60
   61 LAAARDFWTL RYSTCLEDGS YVVCERSLTS ATGGPTGPPS SNFVRAEMKP SGFLIRPCDG 120
  121 GGSILHIVDH VDLDAWSVPE VMRPLYESSK ILAQKMTVAA LRHVRQIAQE TSGEVQYGGG 180
  181 R

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [398-565]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPAVLRTFSQ RLCRGFNDAV NGFVDDGWSP MGSDGAEDVT VMINLSPGKF GGSQYGNSFL  60
   61 PSFGSGVLCA KASMLLQNVP PAVLVRFLRE HRSEWADYGV DAYAAASLRA SPFAVPCARA 120
  121 GGFPSNQVIL PLAQTVEHEE SLEVVRLEGH AYSPEDMGLA RDMYLLQL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [566-693]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSGVDENVVG GCAQLVFAPI DESFADDAPL LPSGFRIIPL EQKSTPNGAS ANRTLDLASA  60
   61 LEGSTRQAGE ADPNGCNFRS VLTIAFQFTF DNHSRDSVAS MARQYVRSIV GSIQRVALAI 120
  121 APRPGSNI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [694-852]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPISVPTSPE ALTLVRWISR SYSLHTGADL FGSDSQTSGD TLLHQLWNHS DAILCCSLKT  60
   61 NASPVFTFAN QTGLDMLETT LVALQDIMLD KTLDEPGRKA LCSEFPKIMQ QGYAHLPAGV 120
  121 CASSMGRMVS YEQATVWKVL EDDESNHCLA FMFVNWSFV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 93.309804
Match: PF08670.3
Description: No description for PF08670.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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