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View Structure Prediction Details

Protein: DTX27_ARATH
Organism: Arabidopsis thaliana
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX27_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
322.0 [0..28] [485..636]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV  60
   61 ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE TLCGQAFGAK KYHMLGVYMQ 120
  121 RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF 180
  181 LQCQLKNRVT AYAAAVALVV HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC 240
  241 GG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.251812
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [243-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPLTWTGLSS EALTGLWEFL KLSASSGVML CLENWYYRIL IIMTGNLQNA RIAVDSLSIC  60
   61 MAINGWEMMI PLAFFAGTGV RVANELGAGN GKGARFATIV SVTQSLIIGL FFWVLIMLLH 120
  121 NQIAWIFSSS VAVLDAVNKL SLLLAFTVLL NSVQPVLSGV AVGSGWQSYV AYINLGCYYC 180
  181 IGVPLGFLMG WGFKLGVMGI WGGMIFGGTA VQTMILSFIT MRCDWEKEAQ KASARINKWS 240
  241 NTIK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.638272
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle