YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PTR33_ARATH
Organism: Arabidopsis thaliana
Length: 590 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR33_ARATH.

Description E-value Query
Range
Subject
Range
PTR1_ARATH - Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1
332.0 [0..7] [559..2]

Back

Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHVSSSHGA KDGSEEAYDY RGNPPDKSKT GGWLGAGLIL GSELSERICV MGISMNLVTY  60
   61 LVGDLHISSA KSATIVTNFM GTLNLLGLLG GFLADAKLGR YKMVAISASV TALGVLLLTV 120
  121 ATTISSMRPP ICDDFRRLHH QCIEANGHQL ALLYVALYTI ALGGGGIKSN VSGFGSDQFD 180
  181 TSDPKEEKQM IFFFNRFYFS ISVGSLFAVI ALVYVQDNVG RGWGYGISAA TMVVAAIVLL 240
  241 CGTKRYRFKK PKGSPFTTIW RVGFLAWKKR KESYPAHPSL LNGYDNTTVP HTEMLKCLDK 300
  301 AAISKNESSP SSKDFEEKDP WIVSTVTQVE EVKLVMKLVP IWATNILFWT IYSQMTTFTV 360
  361 EQATFMDRKL GSFTVPAGSY SAFLILTILL FTSLNERVFV PLTRRLTKKP QGITSLQRIG 420
  421 VGLVFSMAAM AVAAVIENAR REAAVNNDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.154902
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [450-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KISAFWLVPQ YFLVGAGEAF AYVGQLEFFI REAPERMKSM STGLFLSTIS MGFFVSSLLV  60
   61 SLVDRVTDKS WLRSNLNKAR LNYFYWLLVV LGALNFLIFI VFAMKHQYKA DVITVVVTDD 120
  121 DSVEKEVTKK ESSEFELKDI P

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle