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View Structure Prediction Details

Protein: FAH1_ARATH
Organism: Arabidopsis thaliana
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|55777215 - gi|55777215|gb|AAH46985.1| Fa2h protein [Mus musculus]
254.0 [0..7] [237..131]

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Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV  60
   61 I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [62-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLPVVVWCIS RSVSMGCSLP EIVPIVVMGI FIWTFFEYVL HRFVFHIKTK SYWGNTAHYL  60
   61 IHGCHHKHPM DHLRLVFPPT ATAILCFPFW NIAKAISTPS TAPALFGGGM LGYVMYDVTH 120
  121 YYLHHAQPTR PVTKNLKKYH LNHHFRIQDK GFGITSSLWD IVFGTLPTTK APRKEQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 18.376751
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle