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View Structure Prediction Details

Protein: AFB3_ARATH
Organism: Arabidopsis thaliana
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AFB3_ARATH.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
346.0 [0..18] [577..84]

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Predicted Domain #1
Region A:
Residues: [1-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF  60
   61 PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV GLEELRLKRM VVTDESLDLL 120
  121 SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT 180
  181 LMSLNFACLK GETNVAALER LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY 240
  241 ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN 300
  301 HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG 360
  361 LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR LCILEPHKPD HITFQSLDEG 420
  421 FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM 480
  481 RKLEIRDSPF GNAALLADVG RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN 540
  541 NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle