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View Structure Prediction Details

Protein: gi|10176974, gi|...
Organism: Arabidopsis thaliana
Length: 128 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10176974, gi|....

Description E-value Query
Range
Subject
Range
gi|108804351, gi... - gi|68562224|ref|ZP_00601494.1| DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone Dna...
148.0 [0..9] [128..5]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY  60
   61 NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN GLGISQSSSP WTHQLAETTK 120
  121 QQTSKDTV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1xblA
Description: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle