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View Structure Prediction Details

Protein: EBP1_ARATH
Organism: Arabidopsis thaliana
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EBP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|14532886, gi|... - gi|14532886|gb|AAK64125.1| putative nuclear DNA-binding protein G2p [Arabidopsis thaliana], gi|13430...
296.0 [0..1] [392..1]

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Predicted Domain #1
Region A:
Residues: [1-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDDERDEK ELSLTSPEVV TKYKSAAEIV NKALQVVLAE CKPKAKIVDI CEKGDSFIKE  60
   61 QTASMYKNSK KKIERGVAFP TCISVNNTVG HFSPLASDES VLEDGDMVKI DMGCHIDGFI 120
  121 ALVGHTHVLQ EGPLSGRKAD VIAAANTAAD VALRLVRPGK KNTDVTEAIQ KVAAAYDCKI 180
  181 VEGVLSHQLK QHVIDGNKVV LSVSSPETTV DEVEFEENEV YAIDIVASTG DGKPKLLDEK 240
  241 QTTIYKKDES VNYQLKMKAS RFIISEIKQN FPRMPFTARS LEEKRARLGL VECVNHGHLQ 300
  301 PYPVLYEKPG DFVAQIKFTV LLMPNGSDRI TSHTLQELPK KTIEDPEIKG WLALGIKKKK 360
  361 GGGKKKKAQK AGEKGEASTE AEPMDASSNA QE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 2q8kA
Description: No description for 2q8kA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle