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View Structure Prediction Details

Protein: PPA1_ARATH
Organism: Arabidopsis thaliana
Length: 613 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPA1_ARATH.

Description E-value Query
Range
Subject
Range
PPA27_ARATH - Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1
566.0 [0..1] [613..1]
gi|18075958 - gi|18075958|emb|CAD12836.1| diphosphonucleotide phosphatase 1 [Lupinus luteus]
563.0 [0..7] [613..10]
gi|77556254, gi|... - gi|77556254|gb|ABA99050.1| diphosphonucleotide phosphatase 1, putative, expressed [Oryza sativa (jap...
552.0 [0..6] [613..4]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRESLVAILV TVISVLGAIH QVKSHEDQPL SGIAVHKITF GLNEKAYVKA SPTVLGSNGQ  60
   61 HS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELVLVQYSSP KPSDDDWIGV FSPADFNAST CPGDNKMVQP PRLCSAPVKF QYANFSNPRY  60
   61 TNTGTGSLKL QLINQRSDFS FALFSGGLLN PKLVAIS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [160-613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKVAFENPNA PVYPRLALGK EWDEMTVTWT SGYGLNLAEP VVEWGVKGGE RKLSPAGTLT  60
   61 FARNSMCGAP ARTVGWRDPG YIHTAFLKEL WPNSKYTYRV GHRLSNGALI WSKEYQFKSS 120
  121 PFPGQNSVQQ VVIFGDMGKA EVDGSSEYND FQRASLNTTK QLIKDLKKTD AVFHIGDICY 180
  181 ANGYLSQWDQ FIAQIEPIAS TVPYMIASGN HERVWPNSGS FYEGLDSGGE CGVPAETMFY 240
  241 VPAQNRAKVW YSSDYGMFRF CVADTEHDWR EGTEQYNFIE HCLASVDRQK QPWLIFLAHR 300
  301 VLGYSSTYFY AEEGSFAEPM GRESLQKLWQ KYKVDIAIYG HAHNYERTCP VYQSVCTSHE 360
  361 KSNYKAPLNG TIHIVAGGGG AGLAEFSDLQ PNWSLFRDYD YGFLKLTAID HSNLLFEYKK 420
  421 SSDGRVHDSF TISKDYRDIL ACAVDSCPAT TLAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 1kbpA
Description: Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle