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View Structure Prediction Details

Protein: ACFR2_ARATH
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACFR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|109492061 - gi|109492061|ref|XP_001081563.1| PREDICTED: similar to Cytochrome b561 (Cytochrome b-561) [Rattus no...
242.0 [0..2] [229..280]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPVLGGFP IFMVVRVLGF IIAALVLTWT VHYRGGLALS SDNKDHIFNV HPVMMVIGLI  60
   61 LFNGEAMLAY KSVQGT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNLKKLVHLT LQLTAFILSL IGVWAALKFH IDKGIENFYS LHSWLGLACL FLFAFQWAAG  60
   61 FVTYWYPGGS RNSRASLMPW HVFLGISIYA LALVTATTGI LEKVTFLQVN QVITRYSTEA 120
  121 MLVNTMGVLI LILGGFVILG VVTPVSGKDQ VLTQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.56
Match: 1kqfC
Description: Formate dehydrogenase N, cytochrome (gamma) subunit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.585723167263354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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