YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|5903071, gi|2...
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5903071, gi|2....

Description E-value Query
Range
Subject
Range
gi|83283981 - gi|83283981|gb|ABC01898.1| mitochondrial carrier-like protein [Solanum tuberosum]
289.0 [0..18] [339..31]

Back

Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLGAAEEES AQEIHLPADI NWEMLDKSKF FVLGAALFSG VSGALYPAVL MKTRQQVCHS  60
   61 QGSCIKTAFT LVRHEGLRGL YRGFGTSLMG TIPARALYMT ALEVTKSNVG SAAVSLGLTE 120
  121 AKAAAVANAV GGLSAAMAAQ LVWTPVDVVS QRLMVQGSAG LVNASRCNYV NGFDAFRKIV 180
  181 RADGPKGLYR GFGISILTYA PSNAVWWASY SVAQRMVWGG IGCYVCKKDE ESGNNSTTMK 240
  241 PDSKTIMAVQ GVSAAIAGSV SALITMPLDT IKTRLQVLDG EDSSNNGKRG PSIGQTVRNL 300
  301 VREGGWTACY RGLGPRCASM SMSATTMITT YEFLKRLSAK NHDGFYSKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.30103
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle