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View Structure Prediction Details

Protein: JAL30_ARATH
Organism: Arabidopsis thaliana
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAL30_ARATH.

Description E-value Query
Range
Subject
Range
gi|21594017 - gi|21594017|gb|AAM65935.1| putative lectin [Arabidopsis thaliana]
361.0 [0..1] [298..1]

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Predicted Domain #1
Region A:
Residues: [1-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKVEAQGG KGANLWDDGS THDAVTKIQL AAGIDGIQYV QFDYVKNGQP EQAPLRGTKG  60
   61 RVLPADPFVI NHPDEHLVSV EGWYSPEGII QGIKFISNKK TSDVIGSDEG THFTLQVKDK 120
  121 KIIGFHGSAG GNLNSLGAYF APLTTTTPLT PAKQLTAFGS DDGTVWDDGA YVGVKKVYVG 180
  181 QAQDGISAVK FVYDKSPEEV TGEEHGKSTL LGFEEFVLDY PSEYITAVDG TYDKIFGSDG 240
  241 SVITMLRFKT NKQTSPPFGL EAGTVFELKE EGHKIVGFHG RADVLLHKIG VHVRPLSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1zgrA
Description: Crystal structure of the Parkia platycephala seed lectin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle