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View Structure Prediction Details

Protein: BPM3_ARATH
Organism: Arabidopsis thaliana
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BPM3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21595740 - gi|21595740|gb|AAM66127.1| unknown [Arabidopsis thaliana]
283.0 [0..1] [408..1]

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Predicted Domain #1
Region A:
Residues: [1-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI  60
   61 YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ SGKGKHKVHS HFDRALEGGP 120
  121 YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM 180
  181 GQGLKDLLDS EVGCDIAFQV GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI 240
  241 EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC 300
  301 EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL 360
  361 LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT RKEVRAVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle