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View Structure Prediction Details

Protein: QSOX2_ARATH
Organism: Arabidopsis thaliana
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for QSOX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|14334542 - gi|14334542|gb|AAK59679.1| unknown protein [Arabidopsis thaliana]
393.0 [0..1] [495..1]

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Predicted Domain #1
Region A:
Residues: [1-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVHLLLFA GLVIAASSSS PGSRLILREI SDQKDKAVEL NTTNFDSVLK DTPAKYAVVE  60
   61 FFAHWCPACR NYKPHYEKVA RLFNGPDAIH PGIVLMTRVD CAMKTNTKLC DKFSVSHYPM 120
  121 LFWGPPTKFV SGSWEPKKDK SEILVIDDGR TAERLLNWIN KQIGSSYGLD DQKFKNEHAL 180
  181 SNLTDYNQIS QAVYDVEEAT AEAFDIILAH KAIKSSETSA SFIRFIQLLA AHHLSRRCRK 240
  241 GAAEILVNYD DLCPSGNCSY EKSGGNDTLG NFPICGKDVP RGYYMFCRGS KNDTRGFSCG 300
  301 LWVLMHSLSV RIEDGESHFA FTTICDFVNN FFMCDECRLH FNDMC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [346-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSVKTPFKKA RDFVLWVWST HNKVNERLLK DEASLGTGDP KFPKIIWPPK ELCPLCYLSS  60
   61 NQKSIEWDHE HVYKFLKNYY GPKLVSLYKE KSVSRSKEET VSATEDLTVA TNALVVPIGA 120
  121 ALAIAIASCA FGALACYWRT QQKNRKPRRR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.30103
Match: 2h8lA
Description: No description for 2h8lA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle