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View Structure Prediction Details

Protein: gi|9758460, gi|2...
Organism: Arabidopsis thaliana
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758460, gi|2....

Description E-value Query
Range
Subject
Range
gi|30681419, gi|... - gi|8567798|gb|AAF76370.1| unknown protein [Arabidopsis thaliana], gi|30681419|ref|NP_187675.2| VPS60...
196.0 [0..1] [235..1]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIFGAKNN KEPPPSIQDA SDRINKRGDS VEEKVKRLDA ELCKYKDQIK RTRPGPALEA  60
   61 IKARAMRVLK QKKMYEGQRD MLYNQTFNLD QVSFAAEGLK DAQQTMTALK SANKELKGMM 120
  121 KTVKIQDIDN LQDDMMDLMD ESSEIQETLG RSYNVPDDID EDDLLGELDA LEADMGNETE 180
  181 ADGVPSYLQP DKEPDLNDEL NLPSAPMGHT GAPPGRAQAE DEWGLPAVPR ASLRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 2gd5A
Description: No description for 2gd5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle