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View Structure Prediction Details

Protein: FBK77_ARATH
Organism: Arabidopsis thaliana
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBK77_ARATH.

Description E-value Query
Range
Subject
Range
gi|55773855, gi|... - gi|55773953|dbj|BAD72480.1| fimbriata-like [Oryza sativa Japonica Group], gi|55773855|dbj|BAD72393.1...
166.0 [0..1] [409..10]

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Predicted Domain #1
Region A:
Residues: [1-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAETSWTNY PYSYITYVPE AESYREQSDD EAKVETFSMD SLLPDDLLER ILSFLPIASI  60
   61 FRAGTVCKRW NEIVSSRRFL CNFSNNSVSQ RPWYFMFTTT DDPSGYAYDP IIRKWYSFDL 120
  121 PCIETSNWFV ASSCGLVCFM DNDCRNKIYV SNPITKQWRT LIEPPGHKST DYTAMSTSVN 180
  181 RANQAVNRAN RSYSVSIVKS KQVPGNFFQW DLSIHLYSSE TMTWTTLVND VLSGWRGGNE 240
  241 SVICNNVLYF MIYSTGGSDH RHGLIASNLS SIGSPSSGIL MRSFIPMPCS LTCGRLMNLR 300
  301 ERLVIVGGIG KHDRPEVIKG IGIWVLKGKE WVEMAKMPQR FFQGFGEFDE VFASSGTDDL 360
  361 VYIQSYGSPA LLTFDMNLKY WRWSQKCPVT KKFPLQLFTG FCFEPRLEIA P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 1p22A
Description: F-box/WD-repeat protein 1 (beta-TRCP1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle