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View Structure Prediction Details

Protein: ELD1_ARATH
Organism: Arabidopsis thaliana
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELD1_ARATH.

Description E-value Query
Range
Subject
Range
gi|18307504 - gi|18307504|emb|CAD21166.1| SDL-1 protein [Nicotiana plumbaginifolia]
472.0 [0..43] [524..39]
GLYT7_ARATH - Glycosyltransferase-like At3g57200 OS=Arabidopsis thaliana GN=At3g57200 PE=2 SV=1
457.0 [0..43] [528..39]
gi|87241462 - gi|87241462|gb|ABD33320.1| IMP dehydrogenase/GMP reductase, putative [Medicago truncatula]
457.0 [0..43] [527..29]
gi|8467985, gi|3... - gi|8467985|dbj|BAA96586.1| putative SDL-1 protein [Oryza sativa Japonica Group], gi|34904358|ref|NP_...
387.0 [0..50] [523..47]
gi|56679228, gi|... - gi|56697491|ref|YP_167859.1| hypothetical protein SPO2649 [Ruegeria pomeroyi DSS-3], gi|56679228|gb|...
273.0 [0..66] [464..401]
gi|52008844, gi|... - gi|99081614|ref|YP_613768.1| hypothetical protein TM1040_1773 [Silicibacter sp. TM1040], gi|99037894...
268.0 [0..60] [458..389]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTHHHRAP LISASSSSSS SSQNHSFVSR LLLLLTLLPV SLACLAFILQ WRGGGLADPA  60
   61 SASVRSSTSV PGGSDLNHEV FPGMETVSSV SPKSHQSSSD CSNLARSSSP SFPYYADWKF 120
  121 GVDTSLKPKI CITTSTSAGL DQILPWMFYH KVLGVSTFFL FVEGKAATPS ISKVLESIPG 180
  181 VKVIYRTKEL EEKQAKSRIW NETWLSSFFY KPCNYELFVK QSLNMEMAIV MARDAGMDWI 240
  241 LHLDTDELIY PAGAREYSLR RLLLDVPPNV DMVIFPNYES SVERDDIKDP FTEVSMF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.99
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #2
Region A:
Residues: [298-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKNYDHLPKD TYFGMYKEAT RNNPNYFLTY GNGKSVARVQ DHLRPNGAHR WHNYMKTPNE  60
   61 IKLEEAAVLH YTYSKFSDLT SRRDRCGCKP TKEDVKRCFM LDFDRSAFII ASTATDEEML 120
  121 SWYREHVVWG DKDVKTKLLR KGILTRIYSP MVVIQALKES 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [458-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVFSSVVSSA STNLSKKKFL SSIHKSNSSR STASESLPSK ESKSEGISAR HLLEAESAIP  60
   61 PLSPPGMEQA RFFTED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle