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View Structure Prediction Details

Protein: gi|15238304, gi|...
Organism: Arabidopsis thaliana
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238304, gi|....

Description E-value Query
Range
Subject
Range
gi|23095254, gi|... - gi|25010875|ref|NP_735270.1| hypothetical protein gbs0820 [Streptococcus agalactiae NEM316], gi|2309...
gi|77160354, gi|... - gi|77413588|ref|ZP_00789775.1| glutathione S-transferase family protein [Streptococcus agalactiae 51...
203.0 [0..43] [313..9]

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Predicted Domain #1
Region A:
Residues: [1-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVTGLAAR TISSSVAINS RLTQSMAITT ISSSEPISRR FGGLPEIKTP SFAGGVAGVV  60
   61 FFSAAAVSSL GQEVHAKEMA QKFNPKEVVL YQYEACPFCN KVKAFLDYNK IPYKVVEVNP 120
  121 ISKKEIKWSD YKKVPILTVD GEQMVDSSVI IDSLFQKMHP EISKSEDDEE TKWRKWVDNH 180
  181 LVHLLSPNIY RNTSEALESF EYITTHGNFS FTERLVAKYA GATAMYFVSK KLKKKYNITD 240
  241 ERAALYDAAE TWVDALKERP YLGGSKPNLG DLAVFGVLRP IRYLRSGKDM VDNTRIGEWY 300
  301 SRMENTVGEP SRIKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1z9hA
Description: Microsomal prostaglandin E synthase type-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle