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View Structure Prediction Details

Protein: SC35_ARATH
Organism: Arabidopsis thaliana
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SC35_ARATH.

Description E-value Query
Range
Subject
Range
gi|73990618 - gi|73990618|ref|XP_853786.1| PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP ...
144.0 [0..11] [301..122]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHFGRSGPP DISDTYSLLV LNITFRTTAD DLYPLFAKYG KVVDVFIPRD RRTGDSRGFA  60
   61 FVRYKYKDEA HKAVERLDGR VVDGREITVQ FAKYGPNAEK ISKGRVVEPP PKSRRSRSRS 120
  121 PRRSRSPRRS RSPPRRRSPR RSRSPRRRSR DDYR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.522879
Match: 2cjkA
Description: No description for 2cjkA was found.

Predicted Domain #2
Region A:
Residues: [155-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKDYRKRSRS RSYDRRERHE EKDRDHRRRT RSRSASPDEK RRVRGRYDNE SRSHSRSLSA  60
   61 SPARRSPRSS SPQKTSPARE VSPDKRSNER SPSPRRSLSP RSPALQKASP SKEMSPERRS 120
  121 NERSPSPGSP APLRKVDAAS RSQSPYAAE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.49
Match: 2j63A
Description: No description for 2j63A was found.

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