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View Structure Prediction Details

Protein: PNSL2_ARATH
Organism: Arabidopsis thaliana
Length: 190 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNSL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|110739140 - gi|110739140|dbj|BAF01486.1| hypothetical protein [Arabidopsis thaliana]
226.0 [0..10] [190..2]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFTTTNTP PPYLLRKIYH RRVNQPFSVV CCTGEPQQDI FTRRRTLTSL ITFTVIGGAT  60
   61 SSALAQEKWG TRSFIKEKYF MPGLSPEDAA ARIKQTAEGL RDMREMLDHM SWRYVIFYIR 120
  121 LKQAYLSQDL TNAMNILPES RRNDYVQAAN ELVENMSELD FYVRTPKVYE SYLYYEKTLK 180
  181 SIDNVVEFLA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.0
Match: 1nzeA
Description: Crystal structure of PsbQ polypeptide of photosystem II from higher plants
Matching Structure (courtesy of the PDB):

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