YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FOLM_ARATH
Organism: Arabidopsis thaliana
Length: 554 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FOLM_ARATH.

Description E-value Query
Range
Subject
Range
FOL1_PNECA - Folic acid synthesis protein fol1 OS=Pneumocystis carinii GN=fol1 PE=1 SV=1
540.0 [0..7] [549..215]

Back

Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLLSQTLI HTGRFLLRRF LEPPPAVISA VAASRVCFHR YYSSKSLSLV SPLGLHCSSL  60
   61 FSPPALCNSA FSSSATSTTI EVQST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 2cg8A
Description: No description for 2cg8A was found.

Predicted Domain #2
Region A:
Residues: [86-554]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHEVVIALGS NIGNRMNNFR EALRLMKRGG ICVTRHSCLY ETAPVHVTDQ PRFLNAAVRG  60
   61 VTKLGPHELL SVLKTIERDM GRKDGIRYGP RPLDLDILFY GKMRISSDKL IIPHERLWER 120
  121 SFVLAPLVDL LGSAVDNDTV AHWHSLAIHP GGIFQAWERL GGESLIGQDG IQRVLPIGDK 180
  181 LWDFSNKTHV MGILNLTPDS FSDGGKFQSI DSAVSRVRSM ISEGADIIDI GAQSTRPMAS 240
  241 RISSQEELDR LLPVLEAVRG MPEMEEKLIS VDTFNSEVAS EAISNGADIL NDVSAGTLDP 300
  301 NMHKVVAESG VPYMAMHMRG DPCTMQNKEN LQYDDVCKDV ASELYLRVRD AELSGIPAWR 360
  361 VMIDPGIGFS KSVDHNLDII MDLPKIREEM AKRSIAVSHA PILVGPSRKR FLGDICGRPE 420
  421 ATDRDAATVA SVTAGILGGA NIIRVHNVRH NADAAKVCDA MLRRRRSKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 2bmbA
Description: X-ray structure of the bifunctional 6-hydroxymethyl-7,8- dihydroxypterin pyrophosphokinase dihydropteroate synthase from Sacchromyces cerevisiae
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle