YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15231636, gi|...
Organism: Arabidopsis thaliana
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15231636, gi|....

Description E-value Query
Range
Subject
Range
gi|9279785 - gi|9279785|dbj|BAB01206.1| unnamed protein product [Arabidopsis thaliana]
156.0 [0..1] [130..1]

Back

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFTIFFIF FSLCMFGHVS GAGIRIVNEL KNKKTLWMRC YSKNDVLGPT IIPNGGQFTD  60
   61 YFFHNLFGTT RFMCTLKQGP GFSHSQSFRA FKNSGLWDWR AREDGIYLRR IYKTKFDDDT 120
  121 DNLHKEQSWI 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.886057
Match: PF05938.2
Description: No description for PF05938.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.923 N/A N/A b.61.1 Avidin/streptavidin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle