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View Structure Prediction Details

Protein: DMR6_ARATH
Organism: Arabidopsis thaliana
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DMR6_ARATH.

Description E-value Query
Range
Subject
Range
gi|21553527 - gi|21553527|gb|AAM62620.1| flavanone 3-hydroxylase-like protein [Arabidopsis thaliana]
350.0 [0..1] [341..1]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA  60
   61 RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS DDPTKTTRLS TSFNVKKEEV 120
  121 NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY 180
  181 MKKVLGEQGQ HMAVNYYPPC PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA 240
  241 VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL 300
  301 WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.69897
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.29176034651701 bayes_pls_golite062009
oxidoreductase activity 0.188497825387454 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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