Protein: | ERF39_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 179 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF39_ARATH.
Description | E-value | Query Range |
Subject Range |
|
178.0 | [0..4] | [178..20] |
|
175.0 | [0..2] | [178..13] |
|
169.0 | [0..8] | [178..24] |
|
169.0 | [0..4] | [178..20] |
Region A: Residues: [1-99] |
1 11 21 31 41 51 | | | | | | 1 MQDSSSHESQ RNLRSPVPEK TGKSSKTKNE QKGVSKQPNF RGVRMRQWGK WVSEIREPRK 60 61 KSRIWLGTFS TPEMAARAHD VAALAIKGGS AHLNFPELA |
Detection Method: | |
Confidence: | 21.69897 |
Match: | 1gccA |
Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [100-179] |
1 11 21 31 41 51 | | | | | | 1 YHLPRPASAD PKDIQEAAAA AAAVDWKAPE SPSSTVTSSP VADDAFSDLP DLLLDVNDHN 60 61 KNDGFWDSFP YEDPFFLENY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.678 | a.51.1 | Cytochrome c oxidase subunit h |
View | Download | 0.615 | a.118.8 | TPR-like |
View | Download | 0.443 | a.77.1 | DEATH domain |
View | Download | 0.443 | a.77.1 | DEATH domain |
View | Download | 0.399 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.389 | a.118.26 | Description not found. |
View | Download | 0.383 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
View | Download | 0.383 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
View | Download | 0.373 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.345 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.340 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.295 | a.4.1 | Homeodomain-like |
View | Download | 0.285 | a.4.1 | Homeodomain-like |