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View Structure Prediction Details

Protein: DTX17_ARATH
Organism: Arabidopsis thaliana
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX17_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
339.0 [0..12] [475..633]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDGVTPPLL ITEKDTTMIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP  60
   61 LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG KLGIQMQRAM FVLLILSVPL 120
  121 SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC 180
  181 SGITTCLHLL LCWLFVLKTG LGY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 44.200659
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGAALAISVS YWFNVILLSC YVKFSPSCSH SWTGFSKEAF QELYDFSKIA FPSAVMVCLE  60
   61 LWSFELLVLA SGLLPNPVLE TSVLSICLNT SLTIWQISVG LGGAASIRVS NELGAGNPQV 120
  121 AKLAVYVIVG IAVAEGIVVV TVLLSIRKIL GHAFSSDPKI IAYAASMIPI VACGNFLDGL 180
  181 QCVLSGVARG CGWQKIGACV NLGSYYLVGV PLGLLLGFHF HIGGRGLWLG IVTALSVQVL 240
  241 CLSLVTIFTN WDKEAKKATN RVGSSDDKDG DVQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.309804
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle