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View Structure Prediction Details

Protein: CX5C1_ARATH
Organism: Arabidopsis thaliana
Length: 64 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CX5C1_ARATH.

Description E-value Query
Range
Subject
Range
CX5C2_ARATH - Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana GN=At3g62400 PE=2 SV=1
112.0 [0..1] [64..1]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGHKVAHAT LKGPSVVKEL FIGLALGLAA GGLWKMHHWN EQRKTRTFYD LLERGEISVV  60
   61 AAEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 44.49485
Match: PF05799.3
Description: No description for PF05799.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.600 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.592 N/A N/A a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.532 N/A N/A a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.524 N/A N/A a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.516 N/A N/A a.30.2 Homodimeric domain of signal transducing histidine kinase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle