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View Structure Prediction Details

Protein: gi|15225035, gi|...
Organism: Arabidopsis thaliana
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15225035, gi|....

Description E-value Query
Range
Subject
Range
gi|47496868, gi|... - gi|50908051|ref|XP_465514.1| tyrosine-specific protein phosphatase-like [Oryza sativa (japonica cult...
419.0 [0..1] [358..32]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSIRRHAKT VASSCTNLTQ KRTYVDVYMK WKRDPYFDNI EHILRSSQLK SVVSLKNCIV  60
   61 QEPNRCIPIS AISKKTRQFD VSTKIAHFLR KFPSIFEEFV GPEYNLPWFR LTPEATELDR 120
  121 QERVVYQTSA DDLRDRLKKL ILMSKDNVLP LSIVQGMKWY LGLPDDYLQF PDMNLDSSFR 180
  181 FVDMEDGVKG LAVDYNGGDK VLSVLQKNAM KKRRG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVSLEEIEFP LFPSKGCRLR VKIEDWLMEF QKLPYVSPYD DYSCLDPSSD IAEKRVVGFL  60
   61 HELLCLFVEH SAERKKLLCL KKHFGLPQKV HKAFERHPQI FYLSMKNKTC TAILREPYRD 120
  121 KASVETHPVL GVRKKYIQLM KNSELILKSR RNSFGFRDEG VVDKDLDLDF EG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle