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View Structure Prediction Details

Protein: ARR1_ARATH
Organism: Arabidopsis thaliana
Length: 690 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15810171 - gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
551.0 [0..1] [690..1]
gi|33330870 - gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
388.0 [0..2] [686..1]
gi|162460694, gi... - gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays], gi|15667625|dbj|BAB68269.1| respo...
331.0 [0..24] [635..2]
ORR21_ORYSJ - Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica GN=RR21 PE=2 SV=1
328.0 [0..32] [635..11]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL  60
   61 YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL LEHVGLEMDL PVIMMSADDS 120
  121 KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH 180
  181 RGGGGGAAVS GGEDAVDDNS SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV 240
  241 VWSVELHQQF VAAVNQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2oqrA
Description: No description for 2oqrA was found.

Predicted Domain #2
Region A:
Residues: [257-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGVEKAVPKK ILELMNVPGL TRENVASHLQ KYRIYLRRLG 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.64
Match: 1irzA
Description: Arr10-B
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [297-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVSQHQGNLN NSFMTGQDAS FGPLSTLNGF DLQALAVTGQ LPAQSLAQLQ AAGLGRPAMV  60
   61 SKSGLPVSSI VDERSIFSFD NTKTRFGEGL GHHGQQPQQQ PQMNLLHGVP TGLQQQLPMG 120
  121 N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [418-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMSIQQQIAA VRAGNSVQNN GMLMPLAGQQ SLPRGPPPML TSSQSSIRQP MLSNRISERS  60
   61 GFSGRNNIPE SSRVLPTSYT NLTTQHSSSS MPYNNFQPEL PVNSFPLASA PGISVPVRKA 120
  121 TSYQEEVNSS EAGFTTPSYD MFTTRQN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [565-690]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DWDLRNIGIA FDSHQDSESA AFSASEAYSS SSMSRHNTTV AATEHGRNHQ QPPSGMVQHH  60
   61 QVYADGNGGS VRVKSERVAT DTATMAFHEQ YSNQEDLMSA LLKQEGIAPV DGEFDFDAYS 120
  121 IDNIPV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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