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View Structure Prediction Details

Protein: CYT4_ARATH
Organism: Arabidopsis thaliana
Length: 117 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYT4_ARATH.

Description E-value Query
Range
Subject
Range
gi|809608, gi|10... - gi|809608|emb|CAA60610.1| cysteine proteinase inhibitor [Zea mays], pir||S54828 cysteine proteinase ...
129.0 [0..24] [117..35]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMKSLICLS LILLPLVSVV EGLGGGGGLG SRKPIKNVSD PDVVAVAKYA IEEHNKESKE  60
   61 KLVFVKVVEG TTQVVSGTKY DLKIAAKDGG GKIKNYEAVV VEKLWLHSKS LESFKAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1eqkA
Description: Phytocystatin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle