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View Structure Prediction Details

Protein: gi|10177622, gi|...
Organism: Arabidopsis thaliana
Length: 274 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177622, gi|....

Description E-value Query
Range
Subject
Range
gi|92856607, gi|... - gi|92856607|gb|ABE77407.1| At3g50850 [Arabidopsis thaliana], pir||T08406 hypothetical protein F18B3....
129.0 [0..4] [266..1]

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Predicted Domain #1
Region A:
Residues: [1-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITLPLRDDD EENDTYEAKM LLIGENGLDG ESLPPTPLRD GALELQKYNI SSIESTVVIR  60
   61 ELTSQGLSFQ LWPAASTFVT LLDNYRRDPS KSPLTATLLS LKKPSPLNIL ELGSGTGLVG 120
  121 IAAAITLSAN VTVTDLPHVL DNLNFNAEAN AEIVERFGGK VNVAPLRWGE ADDVEVLGQN 180
  181 VDLILASDVV YHDHLYEPLL KTLRLMQLEG KRLIFLMAHL RRWKKESVFF KKARKLFDVD 240
  241 VIHSDVPQES SRIGVVVYRF TTKQPNQNGR IVSC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 1tw2A
Description: Crystal structure of Carminomycin-4-O-methyltransferase (DnrK) in complex with S-adenosyl-L-homocystein (SAH) and 4-methoxy-e-rhodomycin T (M-ET)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.569065423404044 bayes_pls_golite062009
catalytic activity 0.486907672100804 bayes_pls_golite062009
methyltransferase activity 0.155495931533276 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.145822362574272 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle