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View Structure Prediction Details

Protein: P4KB1_ARATH
Organism: Arabidopsis thaliana
Length: 1121 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4KB1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25453507, gi|... - gi|4467359|emb|CAB37928.1| Phosphatidylinositol 4-kinase [Arabidopsis thaliana], pir||T52631 1-phosp...
941.0 [0..1] [1121..1]

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Predicted Domain #1
Region A:
Residues: [1-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMGRFLSLV RGDSAESPRE ITSQSNIIGD TGSNGWLIRF FDSAFFCEWI AVSYLYKHPH  60
   61 AGVRDYLCNR MYTLPLSGIE SYLFQICYMM VHKPSPSLDK FVIDICGKSL KIALKVHWFL 120
  121 LAELEDADDN EGISRIQEKC QIAATLMGEW SPLMRPQNEV STPGSKNQVL NRLLSSKQKL 180
  181 FSLKLSPPTQ KSLSFSPSPG TNVQDDGSQL PAEDNKIFKK LIPSPKVRDA LMFRKSADKD 240
  241 DEESEKEGFF KRLLRDSKGE GDEPIPNSEG FFKRLLKDNK SEDEDITNSS EGFFKRLLSS 300
  301 KGESEELTSS SDGLFKRLLR DNKGDEEELG ANSDSFFKRL LRESKNEDEE SNPNSEGFFK 360
  361 KLFRDSKPED DKVPKEVDDE DKDGFLKKLF REKNDDKRHG SEKNEANGTV YADKKSGEED 420
  421 EREGFFKKFF KEKSDDKKDI VKVDDGNESE GDESPEFSLF KRLFRIHPED AKPTSENENS 480
  481 SNGLVESSPG TENFFRKLFR DRDQSVEDSE LFGSKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [517-1121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HKEKRPGSPK QRDDTPSGKP PLPNNTASQF RKGAYHESLE FVQALCETSY GLVDIFPIED  60
   61 RKIGLRESLA EINFHLSEAE ITGGICFPMG RGVFRVVHIP EDECILLNSR EKAPYMISVE 120
  121 VLKAETPSAK ESSNSQKLSK GGIPLANGDA FLQKPPPWAY PLWTTQEVYR NSADRMSLST 180
  181 AQAIDQAMTP KSEVKVKLVN VSLSVEDRTS ALESFGDPID DVLGEAPRTG LNNDLEWVRV 240
  241 VVTADPGLRM ESIPDPSVPR KKEHRRVPST VAMEEVRAAA AKGEAPPGLP LKGAGQDSSD 300
  301 AQPRANGGML KEGDALSGEL WEGKRDRIRK ASIYGKLPGW DLRSIIVKSG DDCRQEHLAV 360
  361 QLISHFYDIF QEAGLPLWLR PYEVLVTSSY TALIETIPDT ASIHSIKSRY PNITSLRDFF 420
  421 VAKYKENSPS FKLAQRNFVE SMAGYSLVCY LLQVKDRHNG NLLLDEEGHI IHIDFGFMLS 480
  481 NSPGGVNFES APFKLTRELL EVMDSDADGV PSEFFDYFKV LCIQGFLTCR KHAERIILLV 540
  541 EMLQDSGFPC FKGGPRTIQN LRKRFHLSLT EEQCVSLVLS LISSSLDAWR TRQYDYYQRV 600
  601 LNGIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 133.0
Match: 1e8yA
Description: Phoshoinositide 3-kinase (PI3K) helical domain; Phoshoinositide 3-kinase (PI3K); Phoshoinositide 3-kinase (PI3K), catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle