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View Structure Prediction Details

Protein: gi|15229168, gi|...
Organism: Arabidopsis thaliana
Length: 964 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15229168, gi|....

Predicted Domain #1
Region A:
Residues: [1-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESESSSSP RSSLVFAYYV TGHGFGHATR VVEVVRYLIS SGHRVHVVSA APEFVFTMEI  60
   61 HSPNLFIRKV LLDCGSVQAD ALSVDRRASL EKYCEIAVEP RDSILATEAE WLKSIKANLV 120
  121 VSDVVPIACR AAANAGIRSV CVTNFSWDFI YAEYVMAAGH HHRSIVWQIA EDYSHCEFLI 180
  181 RLPGYCPMPA FHDVIDIPLV VRPVHKSGQE VRRELGVPDN VKLLIFNFGG QPTGWTLKEE 240
  241 YLPAGWLCLV CGASAKQELP PNFIALPKDA YTPDVIAASD CMLGKIGYGT VSEALAYKLR 300
  301 FIFVRRDYFN EEPFLRKMLE YYQGGVEMIR RDLLAGCWAP YLERAVTLKP CYDGGIDGGE 360
  361 VAAKILQDTA MGKKRSKLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.154902
Match: 1f0kA
Description: Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [380-964]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSGARRLRDA IILGFQLQRA PGRDLSVPEW YQVAGNEAGI PSVDQTQKPS KFVEGFEILH  60
   61 GDHHGLSDTI GFLDSLATLA KIGGHHQERE HLAAAALFNW EEDIVVARAP GRLDVMGGIA 120
  121 DYSGSLVLLM PTREACHAAV QRNHPSKQKL WKHAEARHHS RDTPILEIVS FGSELSNRGP 180
  181 TFDMDLSDFM EEDGKPISYD KAYHYFSRDP SQKWAAYVAG TILVLMREMD VRFEDSISIL 240
  241 VSSTVPEGKG VSSSASVEVA TMSAVAAAHG LEISPRDVAL LCQKVENYVV GAPCGVMDQM 300
  301 ASACGEANKL LAMICQPAEI LGLVEIPSHI RFWGIDSGIR HSVGGSDYGS VRIGAFIGKT 360
  361 MIRSFAASFA ETNSEEAEEE SSELIESDTS LDYLCNLSPH RFQALYASKL PQSITGEEFL 420
  421 EKYGDHGDSV TTIDKDGTYA IMAPTRHPIY ENFRVQAFKA LLTATPSEEQ VIGLGELMYQ 480
  481 CHDSYSACGI GSDGTDRLVR LVQNMENLKS SKTENGTLYG AKITGGGSGG TVCVIGKSSL 540
  541 RSSEQILQIQ QKYKEATGFM PYVFEGSSPG AGKFGYLKIR KNSAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.221849
Match: 2aj4A
Description: Crystal structure of Saccharomyces cerevisiae Galactokinase in complex with galactose and Mg:AMPPNP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle