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View Structure Prediction Details

Protein: EGY2_ARATH
Organism: Arabidopsis thaliana
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EGY2_ARATH.

Description E-value Query
Range
Subject
Range
gi|42573279 - gi|42573279|ref|NP_974736.1| EGY2; metalloendopeptidase [Arabidopsis thaliana]
492.0 [0..1] [556..1]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLAVASFRG NFGVLSQCSS CCSLQFQPFV AATSSLNFGQ TGTSRRKKDL KLERVFRKRE  60
   61 TLVRVTETQT EPEGNDDEDN KEGKESSADD PPTKIPTELN SQSTVVNEAP GNEEENKAQF 120
  121 SSQDGDKLEV SSGSPLPGVN VSIIIHVIYK DDSIMFSGCL SFIKSCCEQP LQLDDSMRLP 180
  181 KETIDILRGQ VFGFDTFFVT SQEPYEGGVL FKGNLRGKPA TSYEKIKTRM ENNFGDQYKL 240
  241 FLLTNPEDDK PVAVVVPRRS LEPETTAVPE WFAAGSFGLV ALFTLFLRNV PALQSDLLSA 300
  301 FDNLELLKDG LPGALVTALV LGVHELGHIL VANSLGIKLG VPFFVPSWQI GSFGAITRIK 360
  361 NIVAKREDLL KVAAAGPLAG FSLGLILFLI GLFVPP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1miuA
Description: BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [397-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDGIGVVVDA SVFHESFLAG GIAKLLLGDA LKEGTSISLN PLVIWAWAGL LINGINSIPA  60
   61 GELDGGKIAF SIWGRKTATR LTGASIALLG LSALFSDVAF YWVVLIFFLQ RGPIAPLAEE 120
  121 ITVPDDKYVS LGILVLFLSL LVCLPYPFAF TGNEAMMIGL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle