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View Structure Prediction Details

Protein: FBX11_ARATH
Organism: Arabidopsis thaliana
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBX11_ARATH.

Description E-value Query
Range
Subject
Range
FBX10_ARATH - Putative F-box only protein 10 OS=Arabidopsis thaliana GN=FBX10 PE=3 SV=1
181.0 [0..1] [373..1]

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Predicted Domain #1
Region A:
Residues: [1-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVNLPWEL VEEILCRVPP QSLVKFRTVC KQWNSLFDDN KFVNDHFVQS QPQLIFRTES  60
   61 KIYSVAVNFK GPRIEVHELP LAIPGLKSEM PIRLHDYVDC DGLLFCTSYF NGVLIWNPWL 120
  121 RQTRFFPSIH RYPVTYDIGY DNKKQYKMLD YYKCEGDSSI KSIIYEIGLY SKKVKDLESD 180
  181 STWSIFQSNS VSLNGTLYWA GVDVNNGIFI RSFSFSTEKP RTFCSLPFMY DDDNVLALAV 240
  241 FRKDRLSLLN LCNKTSEIKI WLTKNNINDR EVGLEEDVVW INLMTVLIPN FPKFSFYWYN 300
  301 RPDLTYFLDN DDAKRLVICC YDETDQAYIY IVKGDMFKKI KIDQYEVLSD YSRPHFHTYI 360
  361 PSLVRPSRVK EDNKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 1p22A
Description: F-box/WD-repeat protein 1 (beta-TRCP1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle