YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ERF91_ARATH
Organism: Arabidopsis thaliana
Length: 303 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF91_ARATH.

Description E-value Query
Range
Subject
Range
gi|48479328 - gi|48479328|gb|AAT44935.1| putative AP2/EREBP transcription factor [Arabidopsis thaliana]
258.0 [0..1] [303..1]
gi|71983373 - gi|71983373|gb|AAZ57434.1| CRT/DRE binding factor 1 [Iris lactea var. chinensis]
185.0 [0..63] [288..1]
gi|41351817 - gi|41351817|gb|AAS00621.1| DREB1 [Thellungiella salsuginea]
182.0 [0..63] [288..1]

Back

Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI PEGSREMLQS  60
   61 LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS SRV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [104-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCKTRKYRGV RKRPWGKFAA EIRDSTRNGV RVWLGTFQTA EEAAMAYDKA AVRIRGTQKA  60
   61 HTNFQLET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 1gccA
Description: GCC-box binding domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [172-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIKAMEMDCN PNYYRMNNSN TSDPLRSSRK IGLRTGKEAV KAYDEVVDGM VENHCALSYC  60
   61 STKEHSETRG LRGSEETWFD LRKRRRSNED SMCQEVEMQK TVTGEETVCD VFGLFEFEDL 120
  121 GSDYLETLLS SF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle