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View Structure Prediction Details

Protein: gi|25407801, gi|...
Organism: Arabidopsis thaliana
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25407801, gi|....

Description E-value Query
Range
Subject
Range
gi|215737391, gi... - gi|34914480|ref|NP_918587.1| putative 33kDa oxygen evolvingprotein of photosystem II [Oryza sativa (...
237.0 [0..1] [142..165]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLTYTLDE IEGPFEVDYA AVTVHNFLVG SVYRSCSRSS SSWHRRGYFG PKSIPSAFTQ  60
   61 GHVGNKSDQY QGYDNAVALP ARGNNEELAK ENNKITLSVT KSNPESGEVI GAFESIQPSD 120
  121 TDLGATTPKD VKIQGIWYCQ LDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 2axtO
Description: Crystal Structure of Photosystem II from Thermosynechococcus elongatus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle