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View Structure Prediction Details

Protein: FACR7_ARATH
Organism: Arabidopsis thaliana
Length: 409 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FACR7_ARATH.

Description E-value Query
Range
Subject
Range
gi|91085009 - gi|91085009|ref|XP_973431.1| PREDICTED: similar to CG5065 CG5065-PA [Tribolium castaneum]
258.0 [0..2] [407..12]

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Predicted Domain #1
Region A:
Residues: [1-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNCVQFLE NRTILVTGAS GFLAKVLVER ILRLQPNVKR LYLLVRASDK KSAEQRYDVA  60
   61 LGINTFGAIN VLNFAKKCVK PKLLLHVSTV YVCGERPGHI VEKHFAMGES LNGKNKVDIN 120
  121 TERRLADQKS KQFKEQGCSE EETEQAMKDF GLKRARLYGW PNTYVFTKAM GEMLLGHYRE 180
  181 TMPIVIIRPT IITSTFSDPF PGWIEGLKTV DSVIIFYGKG ILKCFLVDQK TVCDIIPVDM 240
  241 VVNAMIAIAA DHCHDSGSHT VYHVGSSNQN PVIYKQIYEM MSRYFMKSPL VGRNGMLIVP 300
  301 KVTRISTLAR FRVYTNLRYK LPIQILGLLS VISLSQRDKF ALHNRKFKMA MRLVKLYKPY 360
  361 VLFKGIFDDK NMETLRIKNE AKDMEKLFGT NPKCIDWEDY FMIRISLAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.221849
Match: 1bxkA
Description: dTDP-glucose 4,6-dehydratase (RmlB)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.62525479779914 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle